PATRIC Workshop Agenda – University of Florida


Monday, July 13, 2015

8:30am            Register for PATRIC Account

9:00am            Overview of PATRIC (

9:30am            Assemble a Genome in PATRIC                               

10:30am          Break

10:45am          Annotate a Genome in PATRIC Using RASTtk

12:00pm          Lunch

1:00pm            Comparative Genomics: Protein Families and Pathways

5:00pm            Day 1: Adjourn


Tuesday, June 16, 2015

9:00am            Metabolic Modeling in PATRIC                                           

9:45                 Proteomic Comparison

10:30am          Break

10:45am          RNA-Seq Pipeline, Downloading Data into PATRIC and differential expression

12:00pm          Lunch

1:00pm            Exploring Genes Identified by RNA-Seq and transcriptomic analysis

5:00pm            Day 2: Adjourn